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1. Oishi Y, Spann NJ, Link VM, Muse ED, Strid T, Edillor C, Kolar MJ, Matsuzaka T, Hayakawa S, Tao J, Kaikkonen MU, Carlin AF, Lam MT, Manabe I, Shimano H, Saghatelian S, and Glass CK. SREBP1 Contributes to Resolution of Pro-inflammatory TLR4 Signaling by Reprogramming Fatty Acid Metabolism. Cell Metab 25: 412-427, 2017.

2. Oishi Y, Hayashi S, Isagawa T, Oshima M, Iwama A, Shimba S, Okamura H and Manabe I. Bmal1 regulates inflammatory responses in macrophages by modulating enhancer RNA transcription. Scientific Reports 2017, in press.

3. Hayashi S, Manabe I, Suzuki Y, Relaix, F and Oishi Y. Klf5 regulates muscle differentiation by directly targeting muscle specific genes in cooperation with MyoD in mice. eLife, 2016, DOI: http://dx.doi.org/10.7554/eLife.17462

4. Oishi Y and Manabe I. Macrophages in age-related chronic inflammatory diseases. Aging and Mechanisms of Disease, 2016 : doi:10.1038/npjamd.2016.18

5. Hachiya, R, Shiihashi T, Shirakawa I, Iwasaki Y, Matsumura Y, Oishi Y, Nakayama Y, Miyamoto Y, Manabe I, Tanaka M, Goda N, Sakai J, Suganami T, and Ogawa Y.
The H3K9methyltranferase Setdb1 regulates TLR4-mediated inflammatory responses in macrophages Sci Rep 2016; 28;6:28845

6. Oishi Y and Manabe I. Integrated regulation of the cellular metabolism and function of immune cells in adipose tissue. Clin Exp Pharmacol Physiol 43:294-303, 2016

7. Oishi Y and Manabe I. Immunometabolic control of homeostasis and inflammation. Infllamation and Regeneration 35(4)185-192, 2015

8. Lam M, Cho H, Lesch H, Heinz S, Oishi-Tanaka Y, Benner C, Kaikkonen M, Salim A, Rosenfeld M, Ecans R, and Glass CK. Rev-Erbs negatively regulate macrophage gene expression by repressing enhancer-directed transcription. Nature 498: 515-513, 2013

9. Eguchi K, Manabe I, Oishi-Tanaka Y, Osugi M, Kono N, Ogata F, Yagi N, Ohto U, Kimoto M, Miyake K, Tobe K, Arai H, Kadowaki T, and Nagai R. Saturated fatty acid and TLR signaling link ß cell dysfunction and islet inflammation. Cell Metab 15: 518-533, 2012

10. Oishi-Tanaka Y, Glass CK. Cyclic phosphatidic acid puts PPARgamma into reverse.
Cell Metab 12: 207-208, 2010

11. Oishi Y, Manabe I, Imai Y, Hara K, Horikoshi M, Fujiu K, Tanaka T, Aizawa T, Kadowaki T, Nagai R. Regulatory polymorphism in transcription factor KLF5 at the MEF2 element alters the response to angiotensin II and is associated with human hypertension. FASEB J 24: 1780-1788, 2010

12. Yagi N, Manabe I, Tottori T, Ishihara A, Ogata F, Kim J. H, Fujiu K, Oishi Y, Itaka K, Kato Y, Yamauchi M, Nagai R. A nanoparticle system specifically designed to deliver short interfering RNA inhibits tumor growth in vivo. Cancer Res 69: 6531-8, 2009

13. Oishi Y, Manabe I, Tobe K, Osugi, M, Kubota T, Fujiu K, Maemura K, Kubota N, Kadowaki T, Nagai R. SUMOylation of KLF5 is a molecular switch regulating PPAR-delta-containing transcriptional programs of lipid metabolism. Nat Med 14: 656-666, 2008

14. Nishimura G, Manabe I, Tsushima K, Fujiu K, Oishi Y, Imai Y, Maemura K, Miyagishi M, Higashi Y, Kondoh H, Nagai R.deltaEF1 mediates TGF-beta signaling in vascular smooth muscle cell differentiation. Dev Cell 11:93-104, 2006

15. Oishi Y, Manabe I, Tobe K, Tsushima K, Shindo T, Fujiu K, Nishimura G, Maemura K, Yamauchi T, Kubota N, Suzuki R, Kitamura T, Akira S, Kadowaki T, Nagai R. Krüppel-like transcription factor KLF5 is a key regulator of adipocyte differentiation. Cell Metab 1:27-39, 2005

16. Kamei N, Tobe K, Suzuki R, Ohsugi M, Watanabe T, Kubota N, Kumagai K, Sakamoto K, Kobayashi M, Yamauchi T, Ueki K, Oishi Y, Nishimura S, Manabe I, Hashimoto H, Ohnishi Y, Ogata H, Tokuyama K, Tsunoda M, Ide T, Murakami K, Nagai R, Kadowaki T. Overexpression of MCP-1 in adipose tissues causes macrophage recruitment and insulin resistance. J Biol Chem 281: 26602-26614, 2006

17. Fujiu K, Manabe I, Ishihara A, Oishi Y, Iwata H, Nishimura G, Shindo T, Maemura K, Kagechika H, Shudo K, Nagai R. Synthetic retinoid Am80 suppresses smooth muscle phenotypic modulation and in-stent neointima formation by inhibiting KLF5. Circ Res 97: 1132-1141, 2005